Experiment summary for ENCSR255SDF

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Mus musculus C57BL/6 midbrain postnatal (0 days)
Biosample Type
tissue
Replication type
isogenic
Description
The libraries contained in this experiment come from independent isolates of midbrain tissue. They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Strand-specific
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
September 25, 2014
Date released
September 3, 2014
Related datasets
ENCSR022KAT 
Reference Epigenome for mouse midbrain (postnatal 0 day).
Tags
ENCYCLOPEDIAv4 tag

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleLibrary
11strain B6NTac;B6NCrl/Lap mixed sex postnatal (0 days) midbrain tissueENCBS039AAAENCLB355PVM
21strain B6NTac;B6NCrl/Lap mixed sex postnatal (0 days) midbrain tissueENCBS555AAAENCLB536RCP