Experiment summary for ENCSR255SDF

doi:10.17989/ENCSR255SDF

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Biosample summary
Mus musculus strain B6NTac;B6NCrl/Lap midbrain tissue postnatal (0 days)
Biosample Type
tissue
Replication type
isogenic
Description
The libraries contained in this experiment come from independent isolates of midbrain tissue. They are stranded PE101 Illumina Hi-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (reverse)
Spike-ins datasets
ENCSR156CIL

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
September 25, 2014
Date released
September 3, 2014
Reference Epigenome
ENCSR022KAT 
Organism Development Series
ENCSR448YVD 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NTac;B6NCrl/Lap mixed sex postnatal (0 days) midbrain tissueENCBS039AAAENCLB355PVM
21Mus musculus strain B6NTac;B6NCrl/Lap mixed sex postnatal (0 days) midbrain tissueENCBS555AAAENCLB536RCP