Experiment summary for ENCSR254OTS

doi:10.17989/ENCSR254OTS

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NCrl limb tissue embryo (12.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 12.5 day mouse limb
Nucleic acid type
DNA
Size range
180-500
Lysis method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E12_5_LM
Date submitted
March 11, 2016
Date released
March 14, 2016
Reference Epigenome
ENCSR589KOM 
Organism Development Series
ENCSR501CNI 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl mixed sex embryo (12.5 days) limb tissueENCBS731DGJENCLB627YZQ
21Mus musculus strain B6NCrl mixed sex embryo (12.5 days) limb tissueENCBS313XRYENCLB025QSH
22Mus musculus strain B6NCrl mixed sex embryo (12.5 days) limb tissueENCBS313XRYENCLB515BAC
12Mus musculus strain B6NCrl mixed sex embryo (12.5 days) limb tissueENCBS731DGJENCLB611TFV