Experiment summary for ENCSR243LNQ

doi:10.17989/ENCSR243LNQ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
PRPF4
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
PRPF4 ChIP-seq on HepG2
Nucleic acid type
DNA
Size range
200-400
Lysis method
SDS
Size selection method
gel
Controls

Attribution

ENCODE3 project
Lab
Xiang-Dong Fu, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
xiang-dong-fu:PRPF4_Batch7_HepG2
Date submitted
March 22, 2016
Date released
October 31, 2016
Annotation (gkmsvm-model)
Submitter comment
December 2017: New fastqs are included, and therefore requires new processed files.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2Visit collection page for ENCORE

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HepG2 cell lineENCBS005KKOENCAB624FBHENCLB186DQE
11Homo sapiens HepG2 cell lineENCBS041GAWENCAB624FBHENCLB623QSQ