1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HCT116

Experiment summary for ENCSR240PRQ

doi:10.17989/ENCSR240PRQ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens HCT116
Biosample Type
cell line
Replication type
isogenic
Nucleic acid type
DNA
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 433
Date submitted
December 5, 2014
Date released
October 19, 2017
Reference Epigenome
ENCSR361KMF 
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens HCT116 cell lineENCBS494OPBENCAB000AXXENCLB742VES
21Homo sapiens HCT116 cell lineENCBS847SOBENCAB000AXXENCLB670RPO

Files

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Output type
Replicates

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