Experiment summary for ENCSR223SII
doi:10.17989/ENCSR223SII
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP605 (unc-119(tm4063) III; wgIs605) whole organism early embryo 1 hour post synchronization using egg bleaching genetically modified (insertion) using bombardment targeting C. elegans F13C5.2
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- This is the ChIP-seq control of transgenic worms expressing F13C5.2-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:F13C5.2-OP605-EE-INPUT
- Date submitted
- October 5, 2017
- Date released
- November 22, 2017
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
---|---|---|---|---|---|
1 | 1 | Caenorhabditis elegans strain OP605 (unc-119(tm4063) III; wgIs605) mixed sex early embryo 1 hour post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans F13C5.2 | ENCBS300JLH | ENCGM128AMY | ENCLB704SWH |
3 | 1 | Caenorhabditis elegans strain OP605 (unc-119(tm4063) III; wgIs605) mixed sex early embryo 1 hour post synchronization using egg bleaching whole organism genetically modified (insertion) using bombardment targeting C. elegans F13C5.2 | ENCBS166UNV | ENCGM128AMY | ENCLB685KUD |