Experiment summary for ENCSR220YXI

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
PRPF4
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
PRPF4 ChIP-seq in K562
Nucleic acid type
DNA
Size range
200-400
Lysis method
SDS
Size selection method
gel
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Xiang-Dong Fu, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
Aliases
xiang-dong-fu:PRPF4_ChIP_K562_batch2
Date submitted
March 4, 2016
Date released
March 7, 2017
Submitter comment
As of March 2nd, 2017, the lab has submitted updated fastqs, requiring new alignments.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCORESearch for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11K562 cell lineENCBS075XHEENCAB624FBHENCLB800ELT
21K562 cell lineENCBS952HNJENCAB624FBHENCLB316FFY