Experiment summary for ENCSR212IKK

doi:10.17989/ENCSR212IKK

Summary

Status
released
Assay
RNA-seq (total RNA-seq)
Target
mab-5
Biosample summary
Caenorhabditis elegans strain VC1477 (mab-5(gk670) III) whole organism hermaphrodite 480 minutes post synchronization using egg bleaching genetically modified (mutagenesis) using mutagen treatment targeting C. elegans mab-5
Biosample Type
whole organisms
Replication type
unreplicated
Nucleic acid type
RNA
Depleted in
rRNA
Size range
350-600
Extraction method
Trizol
Fragmentation methods
shearing (Covaris generic)
Strand specificity
unstranded

Attribution

modERN project
Lab
Robert Waterston, UW
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
robert-waterston:experiment_VC1477_480_1
Date submitted
December 12, 2017
Date released
March 22, 2019
Organism Development Series
ENCSR903WMN 
Submitter comment
Analysis of this data is in progress

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11Caenorhabditis elegans strain VC1477 (mab-5(gk670) III) hermaphrodite 480 minutes post synchronization using egg bleaching whole organism genetically modified (mutagenesis) using mutagen treatment targeting C. elegans mab-5ENCBS035WBOENCGM330OLXENCLB908GYL