Experiment summary for ENCSR204FCV
doi:10.17989/ENCSR204FCV
Summary
- Status
- released
- Assay
- ATAC-seq
- Biosample summary
- Homo sapiens dendritic cell treated with lipopolysaccharide
- Biosample Type
- in vitro differentiated cells
- Replication type
- unreplicated
- Description
- ATAC-seq
- Treatments
- lipopolysaccharide (CHEBI:16412)
- Nucleic acid type
- DNA
- Size range
- 175-500
- Extraction method
- ATAC-seq (Greenleaf & Chang Lab protocol)
- Platform
- Illumina HiSeq 2000
Attribution
Genomics of Gene Regulation Project
- Lab
- Manuel Garber, UMass
- Award
- U01HG007910 (Jeremy Luban, UMass)
- Project
- GGR
- External resources
- Aliases
- manuel-garber:E70_MDDC_Ctrl_0h_ATAC-seq
- Date submitted
- October 12, 2016
- Date released
- January 19, 2017
- Annotation (gkmsvm-model)
- Annotation (ChromBPNet-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens dendritic in vitro differentiated cells treated with lipopolysaccharide | ENCBS903EGN | ENCLB384NOX |