Experiment summary for ENCSR202QJA

Summary

Status
released
Assay
ChIP-seq
Biosample summary
Drosophila melanogaster strain Sox15-GFP whole organism prepupa genetically modified using site-specific recombination
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing Sox15-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation method
sonication (Bioruptor generic)
Size selection method
SPRI
Strand specificity
Non-strand-specific
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:Sox15-GFP
Date submitted
April 10, 2016
Date released
July 6, 2016
Submitter comment
ENCFF335YIJ, ENCFF782IFB were revoked because a software bug accidentally truncated the file content. The submitters have provided replacement files.

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsAntibodyLibrary
21strain Sox15-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Sox15ENCBS398CSAENCGM567XJRENCAB728YTOENCLB803FQK
31strain Sox15-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Sox15ENCBS223GGUENCGM567XJRENCAB728YTOENCLB751WIW
11strain Sox15-GFP mixed sex prepupa whole organism genetically modified (insertion) using site-specific recombination targeting eGFP-Sox15ENCBS533BWBENCGM567XJRENCAB728YTOENCLB489QFD