Experiment summary for ENCSR200QCO
doi:10.17989/ENCSR200QCO
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- pqm-1
- Biosample summary
- Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) whole organism L1 larva genetically modified (insertion) using bombardment targeting C. elegans pqm-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against PQM-1 in L1 larva worms.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:54
- Date submitted
- April 25, 2017
- Date released
- November 6, 2017
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L1 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS512QIU | ENCGM456SDH | ENCAB435FBQ | ENCLB249CTX |
| 2 | 1 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L1 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS962FZC | ENCGM456SDH | ENCAB435FBQ | ENCLB560XRJ |
| 3 | 1 | Caenorhabditis elegans strain OP201 (unc-119(tm4063) III; wgIs201) mixed sex L1 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans pqm-1 | ENCBS670MJF | ENCGM456SDH | ENCAB435FBQ | ENCLB977NVF |