Experiment summary for ENCSR200JYP

doi:10.17989/ENCSR200JYP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF316
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ZNF316 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-574
Date submitted
May 13, 2016
Date released
February 3, 2017
Annotation (gkmsvm-model)
Submitter comment
Please note that the 'mixed platform' warning comes from the archived fastqs that were sequenced on the HiSeq2000 platform that if used, should be paired with the matching HiSeq2000 control ENCSR173USI. The pipeline was run on the fastqs and controls sequenced on the HiSeq4000 platform for consistency.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS576ESJENCAB362XEVENCLB320WIE
21Homo sapiens K562 cell lineENCBS839CNNENCAB362XEVENCLB822CTA