Experiment summary for ENCSR197ZHM
doi:10.17989/ENCSR197ZHM
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Drosophila melanogaster ML-DmD17-c3 nuclear fraction
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- Initial nucleus fractions on D17 Long Total from Lecuyer
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Extraction method
- Trizol
- Fragmentation methods
- chemical (Illumina TruSeq)
- Size selection method
- SPRI beads
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina HiSeq 2000
Attribution
modENCODE Project
- Lab
- Eric Lécuyer, IRCM
- Award
- FRQS-Strategic-Development-Program (Eric Lécuyer, IRCM)
- Project
- modENCODE
- Aliases
- eric-lecuyer:D17-init-Nucleus
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Drosophila melanogaster ML-DmD17-c3 cell line nuclear fraction | ENCBS122LBB | ENCLB864PJC |
| 2 | 1 | Drosophila melanogaster ML-DmD17-c3 cell line nuclear fraction | ENCBS006QKV | ENCLB297JKK |