Experiment summary for ENCSR183CDG
doi:10.17989/ENCSR183CDG
Summary
- Status
- released
- Assay
- ChIP-seq (Control ChIP-seq)
- Control type
- input library
- Biosample summary
- Caenorhabditis elegans strain OP636 (unc-119(tm4063) III; wgIs636) whole organism young adult 63 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans tbx-9
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- This is the ChIP-seq control of transgenic worms expressing TBX-9-eGFP fusion proteins.
- Nucleic acid type
- DNA
- Fragmentation methods
- sonication (generic microtip)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 2000
Attribution
modERN project
- Lab
- Valerie Reinke, Yale
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:TBX-9-OP636-yAd-INPUT
- Date submitted
- October 4, 2016
- Date released
- October 27, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP636 (unc-119(tm4063) III; wgIs636) mixed sex young adult 63 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans tbx-9 | ENCBS790QIY | ENCGM972YTT | ENCLB386MLR |
| 2 | 1 | Caenorhabditis elegans strain OP636 (unc-119(tm4063) III; wgIs636) mixed sex young adult 63 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans tbx-9 | ENCBS574TOY | ENCGM972YTT | ENCLB390LKF |