Experiment summary for ENCSR180ETP

doi:10.17989/ENCSR180ETP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
C34B4.2
Biosample summary
Caenorhabditis elegans strain OP552 (unc-119(tm4063) III; wgIs552) whole organism L1 larva 6 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting C. elegans C34B4.2
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing C34B4.2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:C34B4.2-OP552-L1
Date submitted
October 5, 2017
Date released
November 6, 2017

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
11Caenorhabditis elegans strain OP552 (unc-119(tm4063) III; wgIs552) mixed sex L1 larva 6 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans C34B4.2ENCBS901FWCENCGM597TEJENCAB728YTOENCLB618BDL
21Caenorhabditis elegans strain OP552 (unc-119(tm4063) III; wgIs552) mixed sex L1 larva 6 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting C. elegans C34B4.2ENCBS445RUGENCGM597TEJENCAB728YTOENCLB021SUI