Experiment summary for ENCSR173DMV
Summary
- Status
- released
- Assay
- HiC (Hi-C)
- Biosample summary
- Homo sapiens HCT116 treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Biosample Type
- cell line
- Replication type
- unreplicated
- Description
- HCT116-cmv-OsTIR1-RAD21-mAC 3hr auxin treated (auxin treatment and withdrawal time course)
- Treatments
- 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours
- Nucleic acid type
- DNA
- Library starting quantity
- 1000000cells
- Size range
- 100-400
- Fragmentation methods
- chemical (micrococcal nuclease)
- Size selection method
- SPRI beads
Attribution
ENCODE4 project
- Lab
- Erez Aiden, Baylor
- Award
- UM1HG009375 (Erez Aiden, Baylor)
- Project
- ENCODE
- Aliases
- erez-aiden:HCT116-cmv-OsTIR1-RAD21-mAC-auxin-withdrawal-timecourse-3hr-treated
- Date released
- September 22, 2025
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Homo sapiens HCT116 cell line treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS566ELG | ENCLB778KOU |
| 1 | 2 | Homo sapiens HCT116 cell line treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS566ELG | ENCLB624VTU |
| 1 | 3 | Homo sapiens HCT116 cell line treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hours | ENCBS566ELG | ENCLB465WBY |