Experiment summary for ENCSR163RYW
doi:10.17989/ENCSR163RYW
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- ZNF189
- Biosample summary
- Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eGFP-ZNF189 ChIP-seq on human HEK293 cells.
- Nucleic acid type
- DNA
- Size range
- 450-650
- Platform
- Illumina HiSeq 4000
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- michael-snyder:HEK_eGFP-ZNF189_FRT_ChIP
- Date submitted
- January 20, 2017
- Date released
- November 28, 2017
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- This experiment uses two slightly different protocols for each replicate. Replicate 1 uses 'BravoTruSeq protocol' whereas replicate 2 uses 'TruSeq' protocol.
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189 | ENCBS111GOI | ENCGM615AHN | ENCAB976SGG | ENCLB195KAR |
| 2 | 1 | Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF189 | ENCBS082THU | ENCGM615AHN | ENCAB615WUN | ENCLB762ZJL |