Experiment summary for ENCSR161MXP
doi:10.17989/ENCSR161MXP
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K4me1
- Biosample summary
- Homo sapiens HCT116
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 74.58ng
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 438
- Date submitted
- October 24, 2014
- Date released
- January 23, 2017
- Reference Epigenome
- ENCSR361KMF
- Annotation (physical modeling)
- Submitter comment
- Files ENCFF924HDE, ENCFF993JWW had incorrectly identified paired_end 1 and 2 metadata respectively. They have been corrected to match its fastq file flowcell signature accordingly.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HCT116 cell line | ENCBS494OPB | ENCAB000APS | ENCLB010GQD |
| 2 | 1 | Homo sapiens HCT116 cell line | ENCBS847SOB | ENCAB000APS | ENCLB523TSS |
| 2 | 2 | Homo sapiens HCT116 cell line | ENCBS847SOB | ENCAB000APS | ENCLB029TSZ |