1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. HepG2

Experiment summary for ENCSR156APP

doi:10.17989/ENCSR156APP

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
PTBP1
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
PTBP1 ChIP-seq on HepG2
Nucleic acid type
DNA
Size range
200-400
Lysis method
SDS
Size selection method
gel
Controls

Attribution

ENCODE3 project
Lab
Xiang-Dong Fu, UCSD
Award
U54HG007005 (Brenton Graveley, UConn)
Project
ENCODE
External resources
Aliases
xiang-dong-fu:PTBP1_Batch3
Date submitted
March 21, 2016
Date released
January 19, 2018
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2Visit collection page for ENCORE

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens HepG2 cell lineENCBS495SHDENCAB553IRNENCLB285ZFN
21Homo sapiens HepG2 cell lineENCBS654ERNENCAB553IRNENCLB310SOO

Files

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Output type
Replicates

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