Experiment summary for ENCSR148VUP
doi:10.17989/ENCSR148VUP
Summary
- Status
- released
- Assay
- DNase-seq
- Biosample summary
- Homo sapiens hematopoietic multipotent progenitor cell treated with interleukin-3 for 4 days, kit ligand for 4 days, hydrocortisone succinate for 4 days, erythropoietin for 4 days
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Description
- DNase-seq on 25 year old human adult male hematopoietic multipotent progenitor cell line
- Treatments
- interleukin-3 (UniProtKB:P08700) for 4 days, kit ligand (UniProtKB:P21583) for 4 days, hydrocortisone succinate (CHEBI:31677) for 4 days, erythropoietin (CHEBI:81579) for 4 days
- Nucleic acid type
- DNA
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE3 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG007010 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- References
- Date submitted
- March 30, 2015
- Date released
- August 31, 2015
- Treatment Time Series
- ENCSR963OVY
- Annotation (gkmsvm-model)
- Annotation (ChromBPNet-model)
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens male adult (25 years) hematopoietic multipotent progenitor in vitro differentiated cells treated with interleukin-3 for 4 days, kit ligand for 4 days, hydrocortisone succinate for 4 days, erythropoietin for 4 days | ENCBS924ALK | ENCLB200PCY |
2 | 1 | Homo sapiens male adult (25 years) hematopoietic multipotent progenitor in vitro differentiated cells treated with interleukin-3 for 4 days, kit ligand for 4 days, hydrocortisone succinate for 4 days, erythropoietin for 4 days | ENCBS721DUI | ENCLB809AHE |