Experiment summary for ENCSR134PTC

Summary

Status
released
Assay
ChIP-seq
Target
Control
Biosample summary
Caenorhabditis elegans strain OP202 (unc-119(ed3) III; wgIs202) whole organism L3 larva genetically modified using bombardment
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq against CEG-9 in L3 worms.
Nucleic acid type
DNA
Fragmentation method
sonication (generic microtip)
Strand specificity
Non-strand-specific

Attribution

modENCODE Project
Lab
Michael Snyder, Stanford
Award
U01HG004267 (Michael Snyder, Stanford)
Project
modENCODE
Aliases
modencode:13_input
Date submitted
April 25, 2017
Date released
January 18, 2018

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11strain OP202 (unc-119(ed3) III; wgIs202) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-9ENCBS741EEWENCGM708ABHENCLB864DDE
21strain OP202 (unc-119(ed3) III; wgIs202) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-9ENCBS542MOQENCGM708ABHENCLB119OJR
31strain OP202 (unc-119(ed3) III; wgIs202) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-9ENCBS166OMMENCGM708ABHENCLB818EYN
41strain OP202 (unc-119(ed3) III; wgIs202) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-9ENCBS456RFHENCGM708ABHENCLB529WKN
51strain OP202 (unc-119(ed3) III; wgIs202) mixed sex L3 larva whole organism genetically modified (insertion) using bombardment targeting eGFP-ceh-9ENCBS779DQBENCGM708ABHENCLB479KYN