Experiment summary for ENCSR133QEA
doi:10.17989/ENCSR133QEA
Summary
- Status
- released
- Assay
- eCLIP
- Target
- SF3B1
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- eCLIP experiment on K562 against SF3B1
- Nucleic acid type
- RNA
- Size range
- 175-300
- Fragmentation methods
- see document
- Size selection method
- agarose gel extraction
- Strand specificity
- Strand-specific
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
ENCODE3 project
- Lab
- Gene Yeo, UCSD
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- External resources
- References
- Aliases
- gene-yeo:506
- Date submitted
- March 22, 2016
- Date released
- October 31, 2016
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens K562 cell line | ENCBS318IMK | ENCAB022ALQ | ENCLB203AIU |
2 | 1 | Homo sapiens K562 cell line | ENCBS517UIR | ENCAB022ALQ | ENCLB354LPS |