Experiment summary for ENCSR115TWD
doi:10.17989/ENCSR115TWD
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Mus musculus strain B6NCrl neural tube tissue embryo (13.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- PolyA RNA-Seq from oligo-dT primed Total RNA on embryonic 13.5 day mouse neural tube
- Nucleic acid type
- polyadenylated mRNA
- RNA integrity number
- 9.7 [1-1]9.1 [2-1]
- Library starting quantity
- 10ng
- Size range
- >200
- Extraction method
- Ambion mirVana
- Fragmentation methods
- chemical (Nextera tagmentation)
- Size selection method
- SPRI beads
- Strand specificity
- unstranded
- Spike-ins datasets
- ENCSR884LPM
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Barbara Wold, Caltech
- Award
- U54HG006998 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- References
- Date submitted
- September 23, 2015
- Date released
- October 13, 2015
- Reference Epigenome
- ENCSR832HYG
- Organism Development Series
- ENCSR775KUR
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Mus musculus strain B6NCrl mixed sex embryo (13.5 days) neural tube tissue | ENCBS956BQY | ENCLB302GKB |
| 2 | 1 | Mus musculus strain B6NCrl mixed sex embryo (13.5 days) neural tube tissue | ENCBS549OYR | ENCLB327XFF |