1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. SK-N-MC

Experiment summary for ENCSR113GDB

doi:10.17989/ENCSR113GDB

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
EZH2
Biosample summary
Homo sapiens SK-N-MC
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq against EZH2 using SK-N-MC cell line which was previously described as a neuroepithelioma (ATCC HTB-10). However recent evidence reveals it is Ewing's Sarcoma (www.ncbi.nlm.nih.gov/pubmed/15548687, www.ncbi.nlm.nih.gov/pubmed/25453903, www.ncbi.nlm.nih.gov/biosample/3151999).
Nucleic acid type
DNA
Library starting quantity
6.42ng [2-1]23ng [1-1]
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 875
Date submitted
July 4, 2014
Date released
December 14, 2017
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens SK-N-MC cell lineENCBS203EZTENCAB350TQZENCLB072GUI
11Homo sapiens SK-N-MC cell lineENCBS273LICENCAB913HCFENCLB598TRK

Files

Filter files

File format
Output type
Replicates

No files to display.