1. Experiments
  2. RAMPAGE
  3. Homo sapiens
  4. RPMI7951

Experiment summary for ENCSR104PJD

doi:10.17989/ENCSR104PJD

Summary

Status
released
Assay
RAMPAGE
Biosample summary
Homo sapiens RPMI7951
Biosample Type
cell line
Replication type
isogenic
Description
The libraries contained in this experiment come from independent growths of cell line RPMI-7951 isolated from a metastatic site of a malignant melanoma from an 18 year old caucasian female. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (forward)
Controls

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
April 2, 2015
Date released
April 14, 2015
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens RPMI7951 cell lineENCBS262AAAENCLB148UOQ
21Homo sapiens RPMI7951 cell lineENCBS493TPAENCLB999GHL

Files

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Output type
Replicates

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