Experiment summary for ENCSR103URL

Summary

Status
released
Assay
CRISPRi followed by RNA-seq (CRISPRi RNA-seq)
Target
ZNF384
Biosample summary
Homo sapiens K562 genetically modified using CRISPR
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on K562 cells treated by CRISPR interference targeting ZNF384.
Nucleic acid type
RNA
Size range
>200
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
Aliases
michael-snyder:E-K562-CRISPRi-ZNF384
Date submitted
September 30, 2017
Date released
November 18, 2017

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleModificationsLibrary
11K562 cell line genetically modified (interference) using CRISPR targeting ZNF384ENCBS603QVTENCGM991GGPENCLB234ORW
21K562 cell line genetically modified (interference) using CRISPR targeting ZNF384ENCBS797AKKENCGM991GGPENCLB177UKQ