Experiment summary for ENCSR084NTT

doi:10.17989/ENCSR084NTT

Summary

Status
released
Assay
CRISPRi followed by RNA-seq (CRISPRi RNA-seq)
Target
SRF
Biosample summary
Homo sapiens K562 genetically modified (interference) using CRISPR targeting H. sapiens SRF
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on K562 cells treated by CRISPR interference targeting SRF.
Nucleic acid type
RNA
Size range
>200
Strand specificity
unstranded
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:E-K562-CRISPRi-SRF
Date submitted
September 30, 2017
Date released
November 18, 2017
Gene Silencing Series
ENCSR539CHL 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11Homo sapiens K562 cell line genetically modified (interference) using CRISPR targeting H. sapiens SRFENCBS814DBTENCGM276BTVENCLB177QFO
21Homo sapiens K562 cell line genetically modified (interference) using CRISPR targeting H. sapiens SRFENCBS301VULENCGM276BTVENCLB722VEH