Experiment summary for ENCSR066EBK

doi:10.17989/ENCSR066EBK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
FOXA2
Biosample summary
Homo sapiens HepG2
Biosample Type
cell line
Replication type
isogenic
Description
FOXA2 ChIP-seq on human HepG2
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-74
Date submitted
June 30, 2015
Date released
July 8, 2016
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag DREAM

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HepG2 cell lineENCBS716YFXENCAB582DUMENCLB870SCL
11Homo sapiens HepG2 cell lineENCBS731WFKENCAB582DUMENCLB480XHG