Experiment summary for ENCSR054ZMK
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- NR2F2
- Biosample summary
- Homo sapiens HepG2 expressing RNAi targeting H. sapiens FOXA3
- Biosample Type
- cell line
- Replication type
- unreplicated
- Description
- NR2F2 ChIP-seq on HepG2 cells treated with shRNA targeting FOXA3
- Nucleic acid type
- DNA
- Size range
- 250-450
- Fragmentation methods
- sonication (Bioruptor Pico)
- Platform
- Illumina NovaSeq 6000
- Controls
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award
- UM1HG009442 (Michael Snyder, Stanford)
- Project
- ENCODE
- Aliases
- michael-snyder:HepG2_shFOXA3_chip_for_NR2F2
- Date released
- September 27, 2025
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HepG2 cell line expressing RNAi targeting H. sapiens FOXA3 | ENCBS825SFH | ENCGM051MQI | ENCAB000AJH | ENCLB047ULA |