1. Experiments
  2. ChIP-seq
  3. Drosophila melanogaster
  4. whole organism

Experiment summary for ENCSR054BLW

doi:10.17989/ENCSR054BLW

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
az2
Biosample summary
Drosophila melanogaster strain az2-GFP whole organism embryo (0-16 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster az2
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq on transgenic flies expressing az2-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Kevin White, UChicago
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
External resources
Aliases
kevin-white:az2-GFP
Date submitted
August 2, 2016
Date released
September 29, 2016
Submitter comment
ENCFF802MVX, ENCFF115VRA were revoked because a software bug accidentally truncated the file content. The submitters have provided replacement files.

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31Drosophila melanogaster strain az2-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster az2ENCBS524IEBENCGM738YGRENCAB728YTOENCLB795EDD
21Drosophila melanogaster strain az2-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster az2ENCBS360EFVENCGM738YGRENCAB728YTOENCLB045KIO
11Drosophila melanogaster strain az2-GFP mixed sex embryo (0-16 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster az2ENCBS165GRUENCGM738YGRENCAB728YTOENCLB054QAM

Files

Filter files

File format
Output type
Replicates

No files to display.