1. Experiments
  2. icSHAPE
  3. Homo sapiens
  4. GM12878

Experiment summary for ENCSR052BBY

doi:10.17989/ENCSR052BBY

Summary

Status
released
Assay
icSHAPE
Control type
control
Biosample summary
Homo sapiens GM12878 treated with dimethyl sulfoxide
Biosample Type
cell line
Replication type
isogenic
Description
icSHAPE control (DMSO) on GM12878 immortalized cell line
Treatments
dimethyl sulfoxide (CHEBI:28262)
Nucleic acid type
polyadenylated mRNA
Size range
>200
Strand specificity
Strand-specific

Attribution

ENCODE4 project
Lab
Rob Spitale, UCI
Award
UM1HG009443 (Barbara Wold, Caltech)
Project
ENCODE
External resources
Date submitted
November 10, 2017
Date released
May 13, 2019
Submitter comment
Data will be reprocessed using an updated GENCODE annotation version once the ENCODE4 version has been decided.

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens GM12878 cell line treated with dimethyl sulfoxideENCBS434ZBEENCLB052QDC
21Homo sapiens GM12878 cell line treated with dimethyl sulfoxideENCBS584ZEDENCLB659BXU

Files

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Replicates

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