Experiment summary for ENCSR048CVK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
JUN
Biosample summary
Homo sapiens A549
Biosample Type
cell line
Replication type
isogenic
Description
cJun ChIP-seq on A549 cell line treated with 100 nM dexamethasone for 0 hours.
Nucleic acid type
DNA
Library starting quantity
7ng
Size range
>200
Fragmentation methods
sonication (Bioruptor Twin)
Size selection method
dual SPRI
Controls

Attribution

Genomics of Gene Regulation Project
Lab
Tim Reddy, Duke
Award
U01HG007900 (Tim Reddy, Duke)
Project
GGR
Aliases
tim-reddy:cJun.t00
Date submitted
December 15, 2016
Date released
December 20, 2016
Treatment Time Series
ENCSR588JLN 
ChIP-seq experiments using a 100 nM dexamethasone (CHEBI:41879) treatment and targeting JUN.

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21A549 cell lineENCBS148NZAENCAB085XKXENCLB403GIO
31A549 cell lineENCBS514OCXENCAB085XKXENCLB894JSW