Experiment summary for ENCSR038DJJ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
SMAD1
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
SMAD1 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
150-350
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:K562-SMAD1_600-401-B29_gaiix
Date submitted
July 4, 2014
Date released
July 7, 2014
Submitter comment
We note that this ChIP-seq experiment was performed using an antibody for which we have provided a compliant primary characterization but no secondary characterization. A secondary characterization using IP-MS was attempted, but the experiment failed. There is no remaining antibody from this lot number and therefore additional secondary characterizations cannot be attempted. However, because the replicate ChIP-seq datasets passed the ENCODE IDR ChIP-seq data quality standards, we are releasing the data to the public.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21K562 cell lineENCBS118YJZENCAB000AYHENCLB114XYD
11K562 cell lineENCBS489ZOHENCAB000AYHENCLB711TFY