Experiment summary for ENCSR028UIU

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ATF3
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ATF3 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
450-650
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-379
Date submitted
July 7, 2016
Date released
July 8, 2016
Submitter comment
This experiment is being used in the ENCODE-DREAM Transcription Factor Binding Site Prediction Challenge (https://www.synapse.org/#!Synapse:syn6131484/wiki/400026). The files will be unavailable until after the challenge completes on 09-30-16. UPDATE: There will be a second round to the challenge that is expected to end on 01-11-2017. IMPORTANT: When this experiment was released for DREAM, it was matched with possible_control = ENCSR173USI, which was an input control sequenced on HiSeq2000. We have since associated an input control with matching sequencing platform (HiSeq4000) instead.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag DREAM

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21K562 cell lineENCBS320BULENCAB548QXSENCLB439NIJ
11K562 cell lineENCBS734NZLENCAB548QXSENCLB856XCJ