Experiment summary for ENCSR026ZRP

doi:10.17989/ENCSR026ZRP

Summary

Status
archived
Assay
single-cell RNA sequencing assay (scRNA-seq)
Control type
control
Biosample summary
Mus musculus strain B6NCrl midbrain tissue postnatal (0 days)
Biosample Type
tissue
Replication type
isogenic
Description
Total RNA-seq on postnatal 0 day mouse midbrain (13pgs)
Nucleic acid type
RNA
Library starting quantity
1cell-equivalent
Size range
>200
Extraction method
Ambion mirVana
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR013YHQ, ENCSR133ALU

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
July 30, 2014
Date released
September 29, 2014

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain B6NCrl postnatal (0 days) midbrain tissueENCBS169PZDENCLB719BQO
21Mus musculus strain B6NCrl postnatal (0 days) midbrain tissueENCBS960FNVENCLB669AEL