Experiment summary for ENCSR024LKA

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
HDAC3
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
HDAC3 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
450-650
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-393
Date submitted
April 27, 2016
Date released
January 26, 2018
Submitter comment
We note that this ChIP-seq experiment was performed using an antibody for which we have provided a compliant primary characterization but no secondary characterization. A secondary characterization using IP-MS was attempted, but the experiment failed. There is no remaining antibody from this lot number and therefore additional secondary characterizations cannot be attempted. However, because the replicate ChIP-seq datasets passed the ENCODE IDR ChIP-seq data quality standards, we are releasing the data to the public.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
31K562 cell lineENCBS603CUXENCAB179VMGENCLB907LDV
41K562 cell lineENCBS344LIEENCAB179VMGENCLB253API