Experiment summary for ENCSR022PAU

doi:10.17989/ENCSR022PAU

Summary

Status
released
Assay
RAMPAGE
Biosample summary
Homo sapiens HT1080 cytosolic fraction
Biosample Type
cell line
Replication type
isogenic
Description
The libraries contained in this experiment come from cytoplasmic fractions of a fibrosarcoma immortalized cell line HT1080 derived from the connective tissue from a 35 year old male. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
Nucleic acid type
RNA
Depleted in
rRNA
Size range
>200
Fragmentation methods
see document
Strand specificity
Strand-specific (forward)
Controls

Attribution

ENCODE3 project
Lab
Thomas Gingeras, CSHL
Award
U54HG007004 (Thomas Gingeras, CSHL)
Project
ENCODE
External resources
Date submitted
May 27, 2015
Date released
August 18, 2015
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens HT1080 cell line cytosolic fractionENCBS688VJFENCLB612NNJ
21Homo sapiens HT1080 cell line cytosolic fractionENCBS816VMNENCLB493JGS