Experiment summary for ENCSR018VBD
doi:10.17989/ENCSR018VBD
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CG34367
- Biosample summary
- Drosophila melanogaster strain CG34367 whole organism pupa (24 hours) genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG34367
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq on transgenic flies expressing -eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
- Nucleic acid type
- DNA
- Size range
- 200-800
- Fragmentation methods
- sonication (Bioruptor generic)
- Size selection method
- SPRI beads
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
modERN project
- Lab
- Kevin White, UChicago
- Award
- U41HG007355 (Robert Waterston, UW)
- Project
- modERN
- External resources
- Aliases
- kevin-white:CG34367-GFP
- Date submitted
- September 18, 2018
- Date released
- September 26, 2018
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
---|---|---|---|---|---|---|
1 | 1 | Drosophila melanogaster strain CG34367 pupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG34367 | ENCBS788TEI | ENCGM716USJ | ENCAB728YTO | ENCLB196XUU |
2 | 1 | Drosophila melanogaster strain CG34367 pupa (24 hours) whole organism genetically modified (insertion) using site-specific recombination targeting D. melanogaster CG34367 | ENCBS707USD | ENCGM716USJ | ENCAB728YTO | ENCLB579OME |