Experiment summary for ENCSR018MSO

doi:10.17989/ENCSR018MSO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF148
Biosample summary
Homo sapiens K562 stably expressing ZNF148
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF148 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:ZNF148_K562
Date submitted
April 27, 2016
Date released
December 1, 2017
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Homo sapiens K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS061XWLENCGM325OOBENCAB728YTOENCLB257OJH
31Homo sapiens K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS538KODENCGM325OOBENCAB728YTOENCLB518BGC
41Homo sapiens K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS397IBLENCGM325OOBENCAB728YTOENCLB483SSS
11Homo sapiens K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS915LITENCGM325OOBENCAB728YTOENCLB133JTF