Experiment summary for ENCSR018MSO

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF148
Biosample summary
Homo sapiens K562 genetically modified using stable transfection
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF148 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:ZNF148_K562
Date submitted
April 27, 2016
Date released
December 1, 2017
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS061XWLENCGM325OOBENCAB728YTOENCLB257OJH
31K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS538KODENCGM325OOBENCAB728YTOENCLB518BGC
41K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS397IBLENCGM325OOBENCAB728YTOENCLB483SSS
11K562 cell line stably expressing C-terminal eGFP-tagged ZNF148ENCBS915LITENCGM325OOBENCAB728YTOENCLB133JTF