Experiment summary for ENCSR016WFQ

Summary

Status
released
Assay
CRISPRi followed by RNA-seq (CRISPRi RNA-seq)
Control type
non-specific target
Biosample summary
Homo sapiens K562 genetically modified using CRISPR
Biosample Type
cell line
Replication type
isogenic
Description
RNA-seq on K562 cells treated by CRISPR interference for a non-specific target (batch C control).
Nucleic acid type
RNA
Size range
>200
Strand specificity
Non-strand-specific

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:E-K562-CRISPRi-Ctrl-tx-C
Date submitted
March 28, 2017
Date released
November 18, 2017

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11K562 cell line genetically modified (interference) using CRISPRENCBS861OYOENCGM404HDCENCLB620RBM
21K562 cell line genetically modified (interference) using CRISPRENCBS287NAEENCGM404HDCENCLB851VUS