Experiment summary for ENCSR012TDV
doi:10.17989/ENCSR012TDV
Summary
- Status
- released
- Assay
- polyA plus RNA-seq
- Biosample summary
- Drosophila melanogaster strain yellow cinnabar brown speck whole organism adult 4 days post synchronization at eclosion stage treated with 2.5 mg/mL caffeine for 48 hours
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Treatments
- 2.5 mg/mL caffeine (CHEBI:27732) for 48 hours
- Nucleic acid type
- polyadenylated mRNA
- Size range
- >200
- Extraction method
- Trizol
- Strand specificity
- Strand-specific
- Platform
- Illumina HiSeq 2000
Attribution
modENCODE Project
- Lab
- Susan Celniker, LBNL
- Award
- U01HG004271 (Susan Celniker, LBNL)
- Project
- modENCODE
- Aliases
- modencode:4274, susan-celniker:E-BS483-BS484
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 1 | Drosophila melanogaster strain yellow cinnabar brown speck mixed sex adult 4 days post synchronization at eclosion stage whole organism treated with 2.5 mg/mL caffeine for 48 hours | ENCBS040GYW | ENCLB556OGB |
| 2 | 1 | Drosophila melanogaster strain yellow cinnabar brown speck mixed sex adult 4 days post synchronization at eclosion stage whole organism treated with 2.5 mg/mL caffeine for 48 hours | ENCBS158ILG | ENCLB508UDR |