Experiment summary for ENCSR011PEI

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
ZNF175
Biosample summary
Homo sapiens K562 genetically modified using CRISPR
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-ZNF175 ChIP-seq on human K562
Nucleic acid type
DNA
Size range
200-800
Fragmentation methods
sonication (Bioruptor generic)
Size selection method
SPRI beads
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE3 project
Lab
Kevin White, UChicago
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
kevin-white:ZNF175_K562_CRISPR
Date submitted
March 14, 2016
Date released
June 13, 2016
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21K562 cell line genetically modified (insertion) using CRISPR targeting ZNF175ENCBS200VWPENCGM176KAXENCAB728YTOENCLB350TBY
11K562 cell line genetically modified (insertion) using CRISPR targeting ZNF175ENCBS098BHXENCGM176KAXENCAB728YTOENCLB477VIK