Experiment summary for ENCSR007JSP

doi:10.17989/ENCSR007JSP

Summary

Status
released
Assay
whole-genome shotgun bisulfite sequencing (WGBS)
Biosample summary
Mus musculus strain B6NCrl forebrain tissue embryo (12.5 days)
Biosample Type
tissue
Replication type
isogenic
Description
Whole genome bisulfite-seq on embryonic 12.5 day mouse forebrain
Nucleic acid type
DNA
Size range
180-500
Lysis method
QIAGEN DNeasy Blood & Tissue Kit
Fragmentation methods
shearing (Covaris S2)
Size selection method
Sera-mag SpeedBeads

Attribution

ENCODE3 project
Lab
Joe Ecker, Salk
Award
U54HG006997 (Bing Ren, UCSD)
Project
ENCODE
External resources
Aliases
joe-ecker:E12_5_FB
Date submitted
March 11, 2016
Date released
March 14, 2016
Reference Epigenome
ENCSR296YDZ 
Organism Development Series
ENCSR764YSM 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
22Mus musculus strain B6NCrl mixed sex embryo (12.5 days) forebrain tissueENCBS617DPGENCLB706LDH
12Mus musculus strain B6NCrl mixed sex embryo (12.5 days) forebrain tissueENCBS974GPHENCLB378ISE
11Mus musculus strain B6NCrl mixed sex embryo (12.5 days) forebrain tissueENCBS974GPHENCLB423YAC
21Mus musculus strain B6NCrl mixed sex embryo (12.5 days) forebrain tissueENCBS617DPGENCLB255SGE