Experiment summary for ENCSR006WUS

doi:10.17989/ENCSR006WUS

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
NEUROD1
Biosample summary
Homo sapiens MCF-7
Biosample Type
cell line
Replication type
isogenic
Description
NEUROD1 ChIP-seq on human MCF-7
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:ChIPss-67
Date submitted
June 30, 2015
Date released
January 26, 2018
Submitter comment
We note that this ChIP-seq experiment was performed using an antibody for which we have provided a compliant primary characterization but no secondary characterization. A secondary characterization using IP-MS was attempted, but the experiment failed. There is no remaining antibody from this lot number and therefore additional secondary characterizations cannot be attempted. However, because the replicate ChIP-seq datasets passed the ENCODE IDR ChIP-seq data quality standards, we are releasing the data to the public.
Tags
Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ENCYCLOPEDIAv5

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21MCF-7 cell lineENCBS123ZGIENCAB000BDXENCLB089AQO
11MCF-7 cell lineENCBS609QTYENCAB000BDXENCLB272RXD