Experiment summary for ENCSR005SGO
doi:10.17989/ENCSR005SGO
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- ces-1
- Biosample summary
- Caenorhabditis elegans strain OP174 (unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)) whole organism L4 larva genetically modified (insertion) using bombardment targeting C. elegans ces-1
- Biosample Type
- whole organisms
- Replication type
- isogenic
- Description
- ChIP-seq against eGFP-ces-1 in L4 larva worms.
- Nucleic acid type
- DNA
- Size range
- 150-350
- Fragmentation methods
- sonication (generic microtip)
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
modENCODE Project
- Lab
- Michael Snyder, Stanford
- Award
- U01HG004267 (Michael Snyder, Stanford)
- Project
- modENCODE
- External resources
- Aliases
- modencode:3221
- Date submitted
- March 31, 2014
- Date released
- March 31, 2014
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Antibody | Library |
|---|---|---|---|---|---|---|
| 1 | 1 | Caenorhabditis elegans strain OP174 (unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ces-1 | ENCBS586OKO | ENCGM199MKW | ENCAB435FBQ | ENCLB267WDT |
| 2 | 1 | Caenorhabditis elegans strain OP174 (unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ces-1 | ENCBS800DFU | ENCGM199MKW | ENCAB435FBQ | ENCLB670APQ |
| 4 | 1 | Caenorhabditis elegans strain OP174 (unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ces-1 | ENCBS767NMW | ENCGM199MKW | ENCAB435FBQ | ENCLB304ECS |
| 3 | 1 | Caenorhabditis elegans strain OP174 (unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)) mixed sex L4 larva whole organism genetically modified (insertion) using bombardment targeting C. elegans ces-1 | ENCBS218MFV | ENCGM199MKW | ENCAB435FBQ | ENCLB317NQT |