Experiment summary for ENCSR005AHI
doi:10.17989/ENCSR005AHI
Summary
- Status
- released
- Assay
- siRNA knockdown followed by RNA-seq (siRNA RNA-seq)
- Target
- ZFX
- Biosample summary
- Homo sapiens MCF-7 expressing RNAi targeting H. sapiens ZFX
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on MCF-7 cells treated with siRNA targeting ZFX.
- Nucleic acid type
- RNA
- Size range
- >200
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- peggy-farnham:E-MCF-7-ZFX
- Date submitted
- June 30, 2017
- Date released
- July 27, 2017
- Gene Silencing Series
- ENCSR838YHE
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens MCF-7 cell line expressing RNAi targeting H. sapiens ZFX | ENCBS230HRE | ENCGM989SXT | ENCLB934RMS |
| 3 | 1 | Homo sapiens MCF-7 cell line expressing RNAi targeting H. sapiens ZFX | ENCBS705AVG | ENCGM989SXT | ENCLB367KER |
| 1 | 1 | Homo sapiens MCF-7 cell line expressing RNAi targeting H. sapiens ZFX | ENCBS227IDP | ENCGM989SXT | ENCLB386YWF |