Experiment summary for ENCSR000EUV
doi:10.17989/ENCSR000EUV
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- TCF7L2
- Biosample summary
- Homo sapiens HCT116
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- TCF7L2 ChIP-seq on human HCT-116
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Peggy Farnham, USC
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- December 6, 2010
- Date released
- October 29, 2011
- Annotation (gkmsvm-model)
- Submitter comment
- The data quality is too poor for peak analysis for hg19. Not enough peaks can be called. The GRCh38 data should also be used with caution.
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens HCT116 cell line | ENCBS409MTT | ENCAB000AOA | ENCLB605MYV |
2 | 1 | Homo sapiens HCT116 cell line | ENCBS409MTT | ENCAB000AOA | ENCLB075SCF |