1. Experiments
  2. DNase-seq
  3. Homo sapiens
  4. HCT116

Experiment summary for ENCSR000ENM

doi:10.17989/ENCSR000ENM

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens HCT116
Biosample Type
cell line
Replication type
isogenic
Description
DNase-seq on human HCT-116
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
December 16, 2010
Date released
December 16, 2010
Reference Epigenome
ENCSR361KMF 
Annotation (gkmsvm-model)
Annotation (ChromBPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens HCT116 cell lineENCBS650OZUENCLB474ZZZ
11Homo sapiens HCT116 cell lineENCBS409ENCENCLB475ZZZ

Files

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Output type
Replicates

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