Experiment summary for ENCSR000EMW

doi:10.17989/ENCSR000EMW

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens cardiovascular progenitor cell originated from H7 treated with 5 ng/mL Fibroblast growth factor 2 for 5 days, 10 ng/mL Bone morphogenetic protein 4 for 5 days, 6 ng/mL Activin A for 5 days
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Description
DNase-seq on human H7-hESC differentiated for 5 days
Treatments
5 ng/mL Fibroblast growth factor 2 (UniProtKB:P09038) for 5 days, 10 ng/mL Bone morphogenetic protein 4 (UniProtKB:P12644) for 5 days, 6 ng/mL Activin A (CHEBI:81351) for 5 days
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
January 11, 2011
Date released
March 6, 2012
Treatment Time Series
ENCSR167QXA 
Reference Epigenome
ENCSR689KKY 
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens female embryo cardiovascular progenitor in vitro differentiated cells originated from H7 treated with 5 ng/mL Fibroblast growth factor 2 for 5 days, 10 ng/mL Bone morphogenetic protein 4 for 5 days, 6 ng/mL Activin A for 5 daysENCBS296AAAENCLB445ZZZ
21Homo sapiens female embryo cardiovascular progenitor in vitro differentiated cells originated from H7 treated with 5 ng/mL Fibroblast growth factor 2 for 5 days, 10 ng/mL Bone morphogenetic protein 4 for 5 days, 6 ng/mL Activin A for 5 daysENCBS430FQDENCLB444ZZZ