Experiment summary for ENCSR000EMT

doi:10.17989/ENCSR000EMT

Supersedes ENCSR000EJD

Summary

Status
released
Assay
DNase-seq
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
DNase-seq on human GM12878
Nucleic acid type
DNA
Fragmentation methods
see document

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
January 11, 2011
Date released
May 4, 2011
Reference Epigenome
ENCSR447YYN 
Submitter comment
Fastq file ENCFF001CWQ contains reads of mixed lengths. Read lengths followed by respective number of reads: (28, 12699243), (36, 162429412)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv4Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag ENCYCLOPEDIAv5

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
21Homo sapiens GM12878 cell lineENCBS857VGCENCLB441ZZZ
11Homo sapiens GM12878 cell lineENCBS110ENCENCLB440ZZZ