Experiment summary for ENCSR000EMT
doi:10.17989/ENCSR000EMT
Supersedes ENCSR000EJD
Summary
- Status
- released
- Assay
- DNase-seq
- Biosample summary
- Homo sapiens GM12878
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- DNase-seq on human GM12878
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- References
- Date submitted
- January 11, 2011
- Date released
- May 4, 2011
- Reference Epigenome
- ENCSR447YYN
- Annotation (gkmsvm-model)
- Submitter comment
- Fastq file ENCFF001CWQ contains reads of mixed lengths. Read lengths followed by respective number of reads: (28, 12699243), (36, 162429412)
- Registry of cCREs
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
2 | 1 | Homo sapiens GM12878 cell line | ENCBS857VGC | ENCLB441ZZZ |
1 | 1 | Homo sapiens GM12878 cell line | ENCBS110ENC | ENCLB440ZZZ |